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ProQR Announces First Quarter 2025 Operating and Financial Results

1. ProQR on track to file CTA for AX-0810 in Q2 2025. 2. New CFO and CMO appointments strengthen leadership for growth. 3. Company holds €132.4 million in cash, extending runway to mid-2027. 4. AX-0810 targets cholestatic diseases by modulating NTCP. 5. Potential milestones from Eli Lilly partnership could enhance financial position.

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FAQ

Why Bullish?

The pending CTA for AX-0810 and strong cash position may drive investor confidence. Past milestones in biotech often lead to significant price increases upon successful trials or data readouts.

How important is it?

Current developments are crucial as they prepare ProQR for clinical trials, directly influencing market perception and financial stability.

Why Long Term?

The clinical data readout and potential partnership milestones will occur over the next 1-2 years, indicating a sustained impact on stock valuation over time.

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Axiomer™ ADAR-mediated RNA editing pipeline advancing across liver and CNS programs, with CTA filing on track for Q2 2025 for lead program AX-0810 targeting NTCP for Cholestatic diseases Strengthened leadership with appointments of Chief Financial Officer and Chief Medical Officer€ 132.4 million cash and cash equivalents as of end Q1 providing runway into mid-2027, plus additional potential milestones from Lilly partnership LEIDEN, Netherlands & CAMBRIDGE, Mass., May 08, 2025 (GLOBE NEWSWIRE) -- ProQR Therapeutics N.V. (Nasdaq: PRQR) (ProQR), a company dedicated to changing lives through transformative RNA therapies based on its proprietary Axiomer RNA editing technology platform, today reported its financial and operating results for the first quarter ended March 31, 2025, and provided a business update. “ProQR entered 2025 in a position of strength, with solid fundamentals, a well-capitalized balance sheet, and a clear focus on execution,” said Daniel A. de Boer, Founder and Chief Executive Officer of ProQR. “We remain on track to submit the CTA for our lead RNA editing program, AX-0810 targeting NTCP for cholestatic diseases, in Q2 2025, with our first clinical data readout expected in Q4 – key milestones for our lead Axiomer pipeline program that we believe will drive significant value for stakeholders. I’m delighted that we further strengthened our leadership team with the recent appointments of Chief Financial Officer Dennis Hom and Chief Medical Officer Dr. Cristina Lopez Lopez, bringing deep financial and translational clinical development expertise to support ProQR’s next phase of growth.” Recent Progress In April, ProQR announced the appointments of Dennis Hom as Chief Financial Officer and Cristina Lopez Lopez, MD, PhD as Chief Medical Officer. These key leadership appointments support the advancement of the Company’s Axiomer platform technology and pipeline of RNA editing programs as it enters the clinical stage.Advancing AX-0810 toward CTA filing, on track for Q2 2025. AX-0810 is ProQR’s lead Axiomer RNA editing pipeline program. By modulating NTCP, AX-0810 aims to reduce bile acid accumulation in hepatocytes and address the root cause of cholestatic liver diseases. The program remains on track for a Clinical Trial Application (CTA) filing in Q2 2025, with the initial clinical assessment planned in healthy volunteers.In March, ProQR participated in the RNA Editing Gordon Research Conference in Lucca, Italy, presenting "Developing Axiomer™ RNA Editing Technology Towards Application in Liver and CNS Disease". Accepted scientific abstracts underscore ProQR’s leadership in RNA editing. ProQR will present multiple abstracts at the upcoming American Society of Gene & Cell Therapy (ASGCT) Annual Meeting, taking place May 13-17, 2025 in New Orleans. These presentations will highlight the Company’s proprietary Axiomer RNA editing platform and pipeline programs, including: Oral Presentation (333): “ADAR-Mediated RNA Editing of SLC10A1 (NTCP) as a Therapeutic Approach to Reduce Liver Bile Acid Re-Uptake in Cholestatic Diseases”Poster Presentation (AMA1324): “ADAR-Mediated RNA Editing-Based Correction of PNPLA3|148M Functionality to Address Hepatic Steatosis”Poster Presentation (AMA1427): “ADAR-Mediated RNA Editing of Premature Termination Codon Results in Functional Correction in MECP2 for Rett Syndrome” Anticipated Upcoming Events AX-0810 targeting NTCP for Cholestatic diseases Q2 2025 Clinical Trial Application (CTA) submissionQ4 2025 first clinical target engagement and biomarker data in healthy volunteers AX-2402 targeting MECP2 (R270X) for Rett Syndrome 2025 clinical candidate selection 2026 clinical trial initiation and topline data readout AX-2911 targeting PNPLA3 for MASH 2025 clinical candidate selection 2026 clinical trial initiation and topline data readout AX-1412 targeting B4GALT1 for Cardiovascular diseases mid-2025 update on optimization for GalNAc delivery Continue to execute on partnership with Eli Lilly and Company (Lilly), with potential data updates, milestone income from the existing partnership, and an option to exercise for an additional five targets for expansion to a total of 15 targets, which would result in a $50 million opt-in payment to ProQR.ProQR may selectively form new partnerships, which could include multi-target discovery alliances, or product alliances on specific programs. Financial Highlights At March 31, 2025, ProQR held cash and cash equivalents of € 132.4 million, compared to € 149.4 million cash and cash equivalents at December 31, 2024. Net cash used in operating activities during the three-month period ended March 31, 2025 was € 15.8 million, compared to € 15.1 million for the same period last year. During the first quarter of 2025, the Company achieved a milestone in the collaboration agreement with Eli Lilly earning $1.0 million (€ 918,000). Research and development (R&D) costs were € 12.3 million for the quarter ended March 31, 2025 compared to € 9.3 million for the same period last year. General and administrative costs were € 3.2 million for the quarter ended March 31, 2025 compared to € 3.5 million for the same period last year. Net loss for the three-month period ended March 31, 2025 was € 10.1 million, or € 0.10 per diluted share, compared to € 7.7 million, or € 0.09 per diluted share, for the same period last year. For further financial information for the period ended March 31, 2025, please refer to the Q1 financial report filing available on our website, www.proqr.com under Financials and Filings. About Axiomer™ ProQR is pioneering a next-generation RNA base editing technology called Axiomer™, which could potentially yield a new class of medicines for diverse types of diseases. Axiomer™ “Editing Oligonucleotides”, or EONs, mediate single nucleotide changes to RNA in a highly specific and targeted way using molecular machinery that is present in human cells called ADAR (Adenosine Deaminase Acting on RNA). Axiomer™ EONs are designed to recruit and direct endogenously expressed ADARs to change an Adenosine (A) to an Inosine (I) in the RNA – an Inosine is translated as a Guanosine (G) – correcting an RNA with a disease-causing mutation back to a normal (wild type) RNA, modulating protein expression, or altering a protein so that it will have a new function that helps prevent or treat disease. About ProQR ProQR Therapeutics is dedicated to changing lives through the creation of transformative RNA therapies. ProQR is pioneering a next-generation RNA technology called Axiomer™, which uses a cell’s own editing machinery called ADAR to make specific single nucleotide edits in RNA to reverse a mutation or modulate protein expression and could potentially yield a new class of medicines for both rare and prevalent diseases with unmet need. Based on our unique proprietary RNA repair platform technologies we are growing our pipeline with patients and loved ones in mind. Learn more about ProQR at www.proqr.com. Forward Looking Statements This press release contains forward-looking statements. All statements other than statements of historical fact are forward-looking statements, which are often indicated by terms such as “continue,” "anticipate," "believe," "could," "estimate," "expect," "goal," "intend," "look forward to", "may," "plan," "potential," "predict," "project," "should," "will," "would" and similar expressions. Such forward-looking statements include, but are not limited to, statements regarding our business, technology, strategy, preclinical and clinical model data, our initial pipeline targets and the upcoming strategic priorities and milestones related thereto, the responsibilities, potential strengths and capabilities of our new leadership appointments, the continued advancement of our lead development pipeline programs, including ongoing and planned clinical trials, the anticipated timing of initial clinical data readouts across multiple programs in 2025 and 2026, and the filing of a CTA application for our lead program, AX-0810, in Q2 2025, our Axiomer™ platform, including the continued development and advancement of our Axiomer platform, the therapeutic potential of our Axiomer RNA editing oligonucleotides and product candidates, the timing, progress and results of our preclinical studies and other development activities, including the release of data related thereto, our patent estate, including our anticipated strength and our continued investment in it, as well as the timing of our clinical development, the potential of our technologies and product candidates, the collaboration with Lilly and the intended benefits thereof, including timing for data updates, potential milestones, exercise of an option to expand targets and the receipt of an opt-in payment, our ability to selectively form new partnerships and enter into future collaborations, and our financial position and cash-runway. Forward-looking statements are based on management's beliefs and assumptions and on information available to management only as of the date of this press release. Our actual results could differ materially from those expressed or implied by these forward-looking statements for many reasons, including, without limitation, the risks, uncertainties and other factors in our filings made with the Securities and Exchange Commission, including certain sections of our most recent annual report filed on Form 20-F. These risks and uncertainties include, among others, the cost, timing and results of preclinical studies and clinical trials and other development activities by us and our collaborative partners whose operations and activities may be slowed or halted shortage and pressure on supply and logistics on the global market, economic sanctions and international tariffs; the likelihood of our preclinical and clinical programs being initiated and executed on timelines provided and reliance on our contract research organizations and predictability of timely enrollment of subjects and patients to advance our clinical trials and maintain their own operations; our reliance on contract manufacturers to supply materials for research and development and the risk of supply interruption from a contract manufacturer; the potential for future data to alter initial and preliminary results of early-stage clinical trials; the unpredictability of the duration and results of the regulatory review of applications or clearances that are necessary to initiate and continue to advance and progress our clinical programs; the ability to secure, maintain and realize the intended benefits of collaborations with partners, including the collaboration with Lilly; the possible impairment of, inability to obtain, and costs to obtain intellectual property rights; possible safety or efficacy concerns that could emerge as new data are generated in research and development; general business, operational, financial and accounting risks, and risks related to litigation and disputes with third parties; and risks related to macroeconomic conditions and market volatility resulting from global economic developments, geopolitical events and conflicts, high inflation, rising interest rates, tariffs and potential for significant changes in U.S. policies and regulatory environment. Given these risks, uncertainties and other factors, you should not place undue reliance on these forward-looking statements, and we assume no obligation to update these forward-looking statements, even if new information becomes available in the future, except as required by law. ProQR Therapeutics N.V. Investor and media contact:Sarah KielyProQR Therapeutics N.V.T: +1 617 599 6228skiely@proqr.comorInvestor contact:Peter KelleherLifeSci AdvisorsT: +1 617 430 7579 pkelleher@lifesciadvisors.com Financial Tables PROQR THERAPEUTICS N.V.Unaudited Condensed Consolidated Statement of Financial Position                       March 31,    December 31,          2025   2024         €1,000   €1,000 Assets               Property, plant and equipment       13,608   14,113 Investments in financial assets       —   — Non-current assets       13,608   14,113               Cash and cash equivalents       132,414   149,408 Prepayments and other receivables       5,137   3,747 Other taxes       530   690 Current assets       138,081   153,845 Total assets       151,689   167,958               Equity and liabilities               Equity              Equity attributable to owners of the Company       78,935   88,560 Total equity       78,935   88,560               Liabilities               Borrowings       —   — Lease liabilities       10,738   11,067 Deferred income       28,299   29,429 Non-current liabilities       39,037   40,496               Borrowings       4,655   4,582 Lease liabilities       1,460   1,567 Derivative financial instruments       186   468 Trade payables       414   16 Social securities and other taxes       481   1,478 Deferred income       19,250   21,942 Other current liabilities       7,271   8,849 Current liabilities       33,717   38,902 Total liabilities       72,754   79,398               Total equity and liabilities       151,689   167,958 PROQR THERAPEUTICS N.V.Unaudited Condensed Consolidated Statement of Profit or Loss and Other Comprehensive Income(€ in thousands, except share and per share data)                       Three month period         ended March 31,             2025   2024         €1,000   €1,000 Revenue       4,519   4,450               Other income       222   210               Research and development costs       (12,323)   (9,283) General and administrative costs       (3,234)   (3,452) Total operating costs       (15,557)   (12,735)                 Operating result       (10,816)   (8,075) Finance income and expense       455   488 Results related to financial liabilities measured at fair value through profit or loss       282   (68)                 Result before corporate income taxes       (10,079)   (7,655) Income taxes       —   (3)                 Result for the period       (10,079)   (7,658) Other comprehensive income (foreign exchange differences on foreign operation)       (371)   191                 Total comprehensive income       (10,450)   (7,467)               Result attributable to               Owners of the Company       (10,079)   (7,658) Non-controlling interests       —   —         (10,079)   (7,658) Total comprehensive income attributable to             Owners of the Company       (10,450)   (7,467) Non-controlling interests       —   —         (10,450)   (7,467)                 Share information               Weighted average number of shares outstanding1       105,296,833   81,571,028               Earnings per share attributable to owners of the Company (Euro per share)             Basic loss per share1       (0.10)   (0.09) Diluted loss per share1       (0.10)   (0.09) For these periods the potential exercise of share options is not included in the diluted earnings per share as the Company was loss-making. Due to the anti-dilutive nature of the outstanding options, basic and diluted earnings per share are equal. PROQR THERAPEUTICS N.V.Unaudited Condensed Consolidated Statement of Changes in Equity                                           Attributable to owners of the Company              Numberof shares    ShareCapital    SharePremium    Equity settledEmployeeBenefitReserve    TranslationReserve    AccumulatedDeficit    Total    Non-controllinginterests    TotalEquity          €1,000   €1,000   €1,000   €1,000   €1,000   €1,000   €1,000   €1,000 Balance at January 1, 2024   84,248,384   3,370   412,894   25,159   817   (400,850)   41,390   —   41,390 Result for the period   —   —   —   —   —   (7,658)   (7,658)   —   (7,658) Other comprehensive income   —   —   —   —   191   —   191   —   191 Recognition of share-based payments   —   —   —   736   —   —   736   —   736 Treasury shares transferred   (307,627)   —   —   —   —   —   —   —   — Share options lapsed   —   —   —   (40)   —   40   —   —   — Share options exercised / RSUs vested   307,627   —   162   (278)   —   278   162   —   162                                       Balance at March 31, 2024   84,248,384   3,370   413,056   25,577   1,008   (408,190)   34,821   —   34,821                                       Balance at January 1, 2025   107,710,916   4,308   483,812   26,248   1,350   (427,158)   88,560   —   88,560 Result for the period   —   —   —   —   —   (10,079)   (10,079)   —   (10,079) Other comprehensive income   —   —   —   —   (371)   —   (371)   —   (371) Recognition of share-based payments   —   —   —   758   —   —   758   —   758 Treasury shares transferred   (130,436)   —   —   —   —   —   —   —   — Share options lapsed   —   —   —   (826)   —   826   —   —   — Share options exercised / RSUs vested   130,436   —   67   (180)   —   180   67   —   67                                                Balance at March 31, 2025   107,710,916   4,308   483,879   26,000   979   (436,231)   78,935   —   78,935 PROQR THERAPEUTICS N.V.Unaudited Condensed Consolidated Statement of Cash Flows                       Three month period          ended March 31,             2025   2024         €1.000   €1.000 Cash flows from operating activities               Net result       (10,079)   (7,658) Adjustments for:             — Other income       (222)   — — Depreciation       678   691 — Share-based compensation       758   736 — Financial income and expenses       (508)   (488) — Results related to financial liabilities measured at fair value through profit or loss       (282)   68 — Income tax expenses       —   3               Changes in working capital       (6,721)   (9,224) Cash used in operations       (16,376)   (15,872)                 Corporate income tax paid       —   (3) Interest received       788   932 Interest paid       (210)   (189)                 Net cash used in operating activities       (15,798)   (15,132)                 Cash flow from investing activities             Increase in financial asset - current       —   (17,000) Purchases of property, plant and equipment       (224)   (732)                 Net cash used in investing activities       (224)   (17,732)                 Cash flow from financing activities               Proceeds from exercise of share options       67   162 Repayment of lease liability       (567)   (581)                 Net cash used in financing activities       (500)   (419)                 Net decrease in cash and cash equivalents       (16,522)   (33,283)                 Currency effect cash and cash equivalents       (472)   71 Cash and cash equivalents at beginning of the period       149,408   118,925                 Cash and cash equivalents at the end of the period       132,414   85,713

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